AMTR_s00101p00028940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.6

Description : RNA processing.RNA decay.deadenylation-dependent mechanism.LARP1 XRN4-exoribonuclease cofactor


Gene families : OG_01_0001423 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001423_tree ,
OG_02_0001373 (LandPlants) Phylogenetic Tree(s): OG_02_0001373_tree ,
OG_03_0006521 (SeedPlants) Phylogenetic Tree(s): OG_03_0006521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00028940
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000498.93 No alias No description available 0.01 Archaeplastida
Gb_28833 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 Archaeplastida
LOC_Os01g16110.1 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 Archaeplastida
MA_1763g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28833 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 LandPlants
LOC_Os01g16110.1 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 LandPlants
Gb_28833 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 SeedPlants
LOC_Os01g16110.1 No alias XRN4-exoribonuclease cofactor (LARP1) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006630 La_HTH 371 428
No external refs found!