1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g51306

Spa_g51306 (AGO1)


Aliases : AGO1

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51306

Target Alias Description ECC score Gene Family Method Actions
AT2G27880 AGO5 Argonaute family protein 0.02 OrthoFinder output from all 47 species
AT2G32940 AGO6 Argonaute family protein 0.02 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.02 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.02 OrthoFinder output from all 47 species
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 OrthoFinder output from all 47 species
Aob_g11029 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Aop_g29550 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043652 AGO1 not classified & original description: CDS=139-2811 0.03 OrthoFinder output from all 47 species
Ceric.16G078000.1 PNH, AGO10, ZLL,... not classified & original description: pacid=50589285... 0.04 OrthoFinder output from all 47 species
Dcu_g03128 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05037 PNH, AGO10, ZLL not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06133 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01029383001 AGO1 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os03g47820.1 AGO5, LOC_Os03g47820 Protein argonaute 12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os07g16224.1 AGO9, LOC_Os07g16224 siRNA-integrating factor (AGO) 0.03 OrthoFinder output from all 47 species
Len_g08293 PNH, AGO10, ZLL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30168 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_26780V3.1 AGO9, Pp3c4_26780 Argonaute family protein 0.01 OrthoFinder output from all 47 species
Sam_g08413 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Sam_g25176 No alias siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Tin_g16538 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017367_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Zm00001e025496_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 86 405
No external refs found!