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  5. Spa_g51230

Spa_g51230


Description : alpha-class expansin & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51230
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Aev_g16352 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17360 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17379 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17828 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g39985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04711 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10060 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67734 No alias alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05196 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17737 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10247 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43361 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36048 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11608 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20454 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27814 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019976 No alias alpha-class expansin & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019979 No alias alpha-class expansin & original description: CDS=1-759 0.04 OrthoFinder output from all 47 species
Zm00001e004712_P001 Zm00001e004712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!