Spa_g51109


Description : not classified & original description: none


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51109
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00030870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G42840 PDF1 protodermal factor 1 0.03 OrthoFinder output from all 47 species
Adi_g007335 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g007336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116823 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g00397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12595 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g24247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05496 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g18021 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene00942.t1 Aspi01Gene00942 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41347.t1 Aspi01Gene41347 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene69388.t1 Aspi01Gene69388 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71674.t1 Aspi01Gene71674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013184 No alias not classified & original description: CDS=1-771 0.03 OrthoFinder output from all 47 species
Cba_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G093300.1 Ceric.03G093300 not classified & original description: pacid=50573210... 0.02 OrthoFinder output from all 47 species
Ceric.09G029500.1 Ceric.09G029500 not classified & original description: pacid=50587700... 0.04 OrthoFinder output from all 47 species
Ceric.09G029600.1 Ceric.09G029600 not classified & original description: pacid=50588127... 0.05 OrthoFinder output from all 47 species
Ceric.09G029800.1 Ceric.09G029800 not classified & original description: pacid=50586822... 0.04 OrthoFinder output from all 47 species
Ceric.09G029900.1 Ceric.09G029900 not classified & original description: pacid=50587789... 0.04 OrthoFinder output from all 47 species
Ceric.09G030100.1 Ceric.09G030100 not classified & original description: pacid=50587319... 0.03 OrthoFinder output from all 47 species
Ceric.09G030200.1 Ceric.09G030200 not classified & original description: pacid=50586656... 0.04 OrthoFinder output from all 47 species
Ceric.09G030300.1 Ceric.09G030300 not classified & original description: pacid=50587070... 0.04 OrthoFinder output from all 47 species
Ceric.09G031000.1 Ceric.09G031000 not classified & original description: pacid=50588455... 0.03 OrthoFinder output from all 47 species
Ceric.09G031100.1 Ceric.09G031100 not classified & original description: pacid=50587047... 0.04 OrthoFinder output from all 47 species
Ceric.22G043800.1 Ceric.22G043800 not classified & original description: pacid=50614893... 0.04 OrthoFinder output from all 47 species
Dac_g07202 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28301 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g46939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13226 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13696 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18161 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_12682 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10490.1 LOC_Os01g10490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13660.1 LOC_Os02g13660 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43670.1 LOC_Os04g43670 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g35970.1 LOC_Os06g35970 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g54705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_111671g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_840g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp4g22090.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38186 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g23508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26786 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g23849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011225 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Smo437656 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc07g055950.3.1 PDF1, Solyc07g055950 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g011010.2.1 PDF1, Solyc12g011010 Protodermal factor 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g51721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019923_P004 PDF1, Zm00001e019923 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e030674_P001 Zm00001e030674 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!