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  5. Spa_g50968

Spa_g50968 (GTE3)


Aliases : GTE3

Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50968

Target Alias Description ECC score Gene Family Method Actions
AT2G34900 GTE1, GTE01, IMB1 Transcription factor GTE6 0.03 OrthoFinder output from all 47 species
AT3G27260 GTE8 global transcription factor group E8 0.03 OrthoFinder output from all 47 species
Adi_g057352 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Adi_g086861 GTE8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03209 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02601 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Mp1g20280.1 GTE4 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Mp2g23150.1 GTE7 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g12555 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g13117 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009037_P001 Zm00001e009037 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
Zm00001e021805_P005 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e024513_P001 Zm00001e024513 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e029260_P001 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR027353 NET_dom 432 490
IPR001487 Bromodomain 186 270
No external refs found!