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Description : not classified & original description: none
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g50839 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G11490 | No alias | zinc finger (C2H2 type) family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G27240 | No alias | zinc finger (C2H2 type) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G54630 | No alias | zinc finger protein-related | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06515 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16586 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g33434 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene16934.t1 | Aspi01Gene16934 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene24042.t1 | Aspi01Gene24042 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29956.t1 | Aspi01Gene29956 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063895 | No alias | not classified & original description: CDS=1048-1284 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G048600.1 | Ceric.39G048600 | not classified & original description: pacid=50582455... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008925001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32897 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g46910.1 | LOC_Os06g46910 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01208 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_525155g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13834 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ore_g04292 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07356 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014168 | No alias | not classified & original description: CDS=1-1884 | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008786_P002 | Zm00001e008786 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028937_P001 | Zm00001e028937 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |