1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g50799

Spa_g50799


Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50799

Target Alias Description ECC score Gene Family Method Actions
Adi_g056671 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058298 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17013 HSFA1E, ATHSFA1E transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28626 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10108 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08806 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58633.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G074700.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13968 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035385001 HSFA2, ATHSFA2 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Lfl_g30505 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24815 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02218 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09931 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09098 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33147 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64053 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015790 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g06153 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11248 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17508 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e035680_P002 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!