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  5. Spa_g50473

Spa_g50473


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0007625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50473
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Als_g53237 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g05778 No alias regulatory protein *(CORD) of cortical microtubule... 0.21 OrthoFinder output from all 47 species
Aop_g11118 No alias regulatory protein *(CORD) of cortical microtubule... 0.23 OrthoFinder output from all 47 species
Aspi01Gene56585.t1 Aspi01Gene56585 regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Aspi01Gene61403.t1 Aspi01Gene61403 regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Azfi_s0791.g087244 No alias regulatory protein *(CORD) of cortical microtubule... 0.13 OrthoFinder output from all 47 species
Ceric.02G027600.1 Ceric.02G027600 regulatory protein *(CORD) of cortical microtubule... 0.18 OrthoFinder output from all 47 species
Dcu_g12553 No alias regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Len_g09811 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Msp_g14974 No alias regulatory protein *(CORD) of cortical microtubule... 0.18 OrthoFinder output from all 47 species
Nbi_g05857 No alias regulatory protein *(CORD) of cortical microtubule... 0.23 OrthoFinder output from all 47 species
Nbi_g30819 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Tin_g02127 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 788
No external refs found!