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  5. Spa_g50355

Spa_g50355


Description : not classified & original description: none


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50355

Target Alias Description ECC score Gene Family Method Actions
Aev_g18359 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G000800.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Gb_15284 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
MA_2427g0010 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.04 OrthoFinder output from all 47 species
Mp1g29700.1 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Solyc07g005460.4.1 CPL4, Solyc07g005460 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!