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  5. Spa_g50253

Spa_g50253 (HDG2)


Aliases : HDG2

Description : HD-ZIP IV-type transcription factor & original description: none


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50253

Target Alias Description ECC score Gene Family Method Actions
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
Adi_g006830 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25555 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0301.g063735 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0591.g078757 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06562 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G064400.1 ATML1, Ceric.29G064400 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g13002 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15559 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01029396001 EDT1, HDG11, ATHDG11 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57890.1 PDF2, LOC_Os01g57890 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45250.1 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53540.3 PDF2, LOC_Os04g53540 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10600.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04190.1 PDF2, LOC_Os08g04190 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
LOC_Os08g08820.2 PDF2, LOC_Os08g08820 transcription factor (HD-ZIP IV) 0.07 OrthoFinder output from all 47 species
LOC_Os10g42490.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_10374232g0010 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_10433688g0010 ATML1 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_602026g0020 HDG2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_9455995g0010 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Nbi_g13790 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001922 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005255 ATML1 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Solyc01g091630.3.1 ANL2, AHDP,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002453_P001 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.07 OrthoFinder output from all 47 species
Zm00001e006870_P004 HDG2, Zm00001e006870 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e015997_P002 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e021649_P002 PDF2, Zm00001e021649 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e023786_P003 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e039947_P001 HDG2, Zm00001e039947 transcription factor (HD-ZIP IV) 0.07 OrthoFinder output from all 47 species
Zm00001e041695_P001 PDF2, Zm00001e041695 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e042218_P002 HDG2, Zm00001e042218 transcription factor (HD-ZIP IV) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!