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  5. Spa_g49778

Spa_g49778 (AS2)


Aliases : AS2

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49778
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00044170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.04 OrthoFinder output from all 47 species
AT1G31320 LBD4 LOB domain-containing protein 4 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.04 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 OrthoFinder output from all 47 species
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.02 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.04 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.02 OrthoFinder output from all 47 species
Adi_g088391 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15807 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10153 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19447 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64401 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70670 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15025.t1 LBD19, Aspi01Gene15025 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41937.t1 AS2, Aspi01Gene41937 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43917.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24489 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36506 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G082500.1 LOB, Ceric.01G082500 AS2/LOB-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.02G060200.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G084800.1 LBD25, Ceric.12G084800 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g45227 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09508 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32484 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29091 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12391 LBD25 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26972 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007677001 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01016326001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
Gb_14010 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_16914 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_29853 LBD4 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_39343 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_40767 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g66590.2 AS2, LOC_Os01g66590 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g57490.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Len_g10227 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_101817g0010 LBD29, ASL16 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_88711g0010 LBD25 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_9412105g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
MA_962403g0010 LBD19 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Msp_g30882 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43952 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44204 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56591 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21903 LBD22 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24707 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25313 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11808 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14631 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33439 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g069440.3.1 LBD4, Solyc02g069440 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc03g095940.1.1 LBD21, Solyc03g095940 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc03g112430.1.1 LOB, Solyc03g112430 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc11g045530.3.1 LBD4, Solyc11g045530 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Spa_g29899 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 9 105
No external refs found!