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  5. Spa_g49690

Spa_g49690


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49690
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Adi_g081309 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ala_g12022 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52686.t1 Aspi01Gene52686 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g23720.1 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ppi_g05890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 236 262
IPR000571 Znf_CCCH 121 146
IPR041367 Znf-CCCH_4 184 205
No external refs found!