Spa_g49559 (EMB3003)


Aliases : EMB3003

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0003205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49559
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00180p00054930 EMB3003,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 OrthoFinder output from all 47 species
AT1G34430 EMB3003 2-oxoacid dehydrogenases acyltransferase family protein 0.03 OrthoFinder output from all 47 species
AT3G25860 LTA2, PLE2 2-oxoacid dehydrogenases acyltransferase family protein 0.05 OrthoFinder output from all 47 species
Ceric.36G026000.1 LTA2, PLE2,... EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33440.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
LOC_Os12g08170.1 EMB3003, LOC_Os12g08170 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
MA_10433674g0010 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
Mp4g18690.1 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
Solyc05g009530.3.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.02 OrthoFinder output from all 47 species
Zm00001e004154_P002 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Zm00001e018405_P001 EMB3003, Zm00001e018405 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Zm00001e022439_P001 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000089 Biotin_lipoyl 48 119
IPR001078 2-oxoacid_DH_actylTfrase 265 484
IPR004167 PSBD 184 218
No external refs found!