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  5. Pp3c17_19520V3.1

Pp3c17_19520V3.1


Description : chromatin remodeling 1


Gene families : OG_01_0000082 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000082_tree ,
OG_02_0005519 (LandPlants) Phylogenetic Tree(s): OG_02_0005519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_19520V3.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00063470 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.RNA-independent... 0.04 Archaeplastida
AMTR_s00111p00031560 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
AT5G18620 CHR17 chromatin remodeling factor17 0.02 Archaeplastida
AT5G66750 CHR01, CHR1,... chromatin remodeling 1 0.02 Archaeplastida
Cpa|evm.model.tig00000217.25 No alias Chromatin structure-remodeling complex protein SYD... 0.01 Archaeplastida
Cpa|evm.model.tig00000691.35 No alias Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000863.2 No alias TATA-binding protein-associated factor BTAF1... 0.01 Archaeplastida
Cre03.g158550 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.01 Archaeplastida
Cre08.g377200 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.02 Archaeplastida
Cre09.g390000 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
GSVIVT01018979001 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_16888 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Gb_18673 No alias chromatin remodeling factor (Chd3/Mi-2) 0.02 Archaeplastida
LOC_Os01g27040.1 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida
LOC_Os03g51230.2 No alias chromatin remodeling factor (DDM1) 0.04 Archaeplastida
LOC_Os07g46590.1 No alias chromatin remodeling factor (Chd1). component CHR5 of... 0.02 Archaeplastida
LOC_Os09g27060.1 No alias chromatin remodeling factor (DDM1) 0.06 Archaeplastida
MA_102992g0010 No alias Probable chromatin-remodeling complex ATPase chain... 0.02 Archaeplastida
MA_104034g0010 No alias chromatin remodeling factor (DDM1) 0.09 Archaeplastida
MA_42406g0010 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Mp3g15030.1 No alias chromatin remodeling factor (Iswi) 0.02 Archaeplastida
Mp4g12200.1 No alias chromatin remodeling factor (DDM1) 0.06 Archaeplastida
Pp3c20_11500V3.1 No alias chromatin remodeling 5 0.03 Archaeplastida
Smo102612 No alias Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo155996 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
Solyc01g079690.4.1 No alias chromatin remodeling factor (Snf2) 0.03 Archaeplastida
Solyc02g062780.4.1 No alias chromatin remodeling factor (DDM1) 0.08 Archaeplastida
Solyc02g085390.4.1 No alias chromatin remodeling factor (DDM1) 0.07 Archaeplastida
Solyc06g054560.3.1 No alias chromatin remodeling factor (Iswi) 0.06 Archaeplastida
Zm00001e005517_P002 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Zm00001e011541_P001 No alias chromatin remodeling factor (DDM1) 0.06 Archaeplastida
Zm00001e017643_P001 No alias chromatin remodeling factor (Iswi) 0.06 Archaeplastida
AMTR_s00059p00063470 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.RNA-independent... 0.03 LandPlants
GSVIVT01018979001 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.07 LandPlants
Gb_16888 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.1 LandPlants
LOC_Os03g51230.2 No alias chromatin remodeling factor (DDM1) 0.03 LandPlants
LOC_Os09g27060.1 No alias chromatin remodeling factor (DDM1) 0.06 LandPlants
MA_104034g0010 No alias chromatin remodeling factor (DDM1) 0.07 LandPlants
MA_42406g0010 No alias chromatin remodeling factor (DDM1) 0.02 LandPlants
Mp4g12200.1 No alias chromatin remodeling factor (DDM1) 0.05 LandPlants
Solyc02g062780.4.1 No alias chromatin remodeling factor (DDM1) 0.09 LandPlants
Solyc02g085390.4.1 No alias chromatin remodeling factor (DDM1) 0.06 LandPlants
Zm00001e005517_P002 No alias chromatin remodeling factor (DDM1) 0.03 LandPlants
Zm00001e011541_P001 No alias chromatin remodeling factor (DDM1) 0.04 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!