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  5. Spa_g49370

Spa_g49370 (SIZ1, ATSIZ1)


Aliases : SIZ1, ATSIZ1

Description : not classified & original description: none


Gene families : OG0002076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49370

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00092680 SIZ1, ATSIZ1,... Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Cba_g14823 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g500900 SIZ1, ATSIZ1 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
GSVIVT01025151001 SIZ1, ATSIZ1 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
LOC_Os05g03430.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.02 OrthoFinder output from all 47 species
Pnu_g13120 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g069160.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!