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  5. Spa_g49150

Spa_g49150


Description : not classified & original description: none


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00169870 XRI1, XRI,... Protein XRI1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene48552.t1 Aspi01Gene48552 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22087 XRI1, XRI not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os09g27590.1 LOC_Os09g27590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22621 XRI1, XRI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023784_P001 Zm00001e023784 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040712_P004 XRI1, XRI, Zm00001e040712 Protein XRI1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!