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  5. Spa_g49025

Spa_g49025


Description : not classified & original description: none


Gene families : OG0007339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49025

Target Alias Description ECC score Gene Family Method Actions
Aev_g04189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012632 No alias not classified & original description: CDS=1-3870 0.07 OrthoFinder output from all 47 species
Ceric.25G042600.1 Ceric.25G042600 not classified & original description: pacid=50593354... 0.07 OrthoFinder output from all 47 species
Len_g58715 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g41659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002969_P002 Zm00001e002969 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 659 720
IPR025605 OST-HTH/LOTUS_dom 803 872
IPR002110 Ankyrin_rpt 162 248
IPR002110 Ankyrin_rpt 437 516
No external refs found!