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  5. Spa_g49023

Spa_g49023


Description : not classified & original description: none


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49023

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00122770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G46380 No alias Protein of unknown function (DUF3133) 0.05 OrthoFinder output from all 47 species
Adi_g008083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g43944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g62995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46515.t1 Aspi01Gene46515 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0389.g067652 No alias not classified & original description: CDS=131-2617 0.05 OrthoFinder output from all 47 species
Azfi_s0533.g076059 No alias not classified & original description: CDS=605-1729 0.03 OrthoFinder output from all 47 species
Dac_g16946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019501001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01027058001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g15820.1 LOC_Os02g15820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g33320.1 LOC_Os06g33320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08412 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g14502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g47243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009119 No alias not classified & original description: CDS=313-2328 0.03 OrthoFinder output from all 47 species
Solyc01g095590.3.1 Solyc01g095590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014265_P001 Zm00001e014265 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024817_P001 Zm00001e024817 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037062_P001 Zm00001e037062 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 615 654
No external refs found!