Spa_g48925 (ATPIN4, PIN4)


Aliases : ATPIN4, PIN4

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48925
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00137670 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
Adi_g011681 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17447 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26431 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16498 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32966 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15414 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18588 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g026982 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0076.g037837 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044237 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G080600.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G088400.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G035300.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G075900.1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03399 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07064 PIN7, ATPIN7 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025748001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Len_g02406 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14570 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40526 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Msp_g20007 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05421 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27942 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02383 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07600 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Smo234325 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Solyc06g059730.3.1 PIN6, Solyc06g059730 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Tin_g05183 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e019540_P001 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e020346_P002 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 680
No external refs found!