Spa_g48224


Description : component *(ZFC3H1) of PAXT nucleoplasmic activation complex & original description: none


Gene families : OG0005919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005919_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48224
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Aob_g19968 No alias component *(ZFC3H1) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Dcu_g16818 No alias component *(ZFC3H1) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Lfl_g34715 No alias component *(ZFC3H1) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Sam_g48944 No alias component *(ZFC3H1) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Smo437272 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g011380.4.1 Solyc04g011380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019607 Putative_zinc-finger_domain 1449 1467
No external refs found!