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  5. Spa_g48072

Spa_g48072


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48072

Target Alias Description ECC score Gene Family Method Actions
AT5G02390 No alias Protein of unknown function (DUF3741) 0.03 OrthoFinder output from all 47 species
Aev_g08851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01340.t1 Aspi01Gene01340 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12189 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g14870.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g15321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20124 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008010 No alias not classified & original description: CDS=1-366 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014888 No alias not classified & original description: CDS=1-3741 0.03 OrthoFinder output from all 47 species
Sam_g09091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR022212 DUF3741 140 172
No external refs found!