Spa_g48038

Description : not classified & original description: none

Gene families : OG0003838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003838_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g48038

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ore_g16011	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005669	transcription factor TFIID complex	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
CC	GO:0017053	transcription repressor complex	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000061	Surp	13	62

External Links

No external refs found!

Spa_g48038

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation