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  5. Spa_g47898

Spa_g47898


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47898

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Aev_g26527 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g18611 No alias putative silicon efflux transporter *(LSI2) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene25042.t1 Aspi01Gene25042 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32907.t1 Aspi01Gene32907 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32908.t1 Aspi01Gene32908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07480 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g32803 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028896001 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Msp_g32066 No alias putative silicon efflux transporter *(LSI2) & original... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015985 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g44746 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Tin_g02811 No alias putative silicon efflux transporter *(LSI2) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 20 495
No external refs found!