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  5. Spa_g47869

Spa_g47869 (SLAH3)


Aliases : SLAH3

Description : anion channel *(SLAC) & original description: none


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47869
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Als_g19840 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34210 SLAH3 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63456.t1 RCD3, CDI3,... anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G050700.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g44610 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42434 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30473 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39869 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os01g43460.2 SLAH3, LOC_Os01g43460 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
MA_10270970g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Msp_g14267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38127 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44302 SLAH3 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31917 RCD3, CDI3, SLAC1, OZS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g007770.3.1 SLAH3, Solyc03g007770 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Solyc03g031590.4.1 SLAH1, Solyc03g031590 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Solyc06g036440.2.1 SLAH3, Solyc06g036440 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 252 555
No external refs found!