Pp3c17_16370V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0000134 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000134_tree ,
OG_02_0000111 (LandPlants) Phylogenetic Tree(s): OG_02_0000111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_16370V3.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.02 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT3G24230 No alias Pectate lyase family protein 0.03 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT4G13710 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G55720 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01033671001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.06 Archaeplastida
Gb_02248 No alias pectate lyase 0.05 Archaeplastida
Gb_19802 No alias pectate lyase 0.02 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.02 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.03 Archaeplastida
MA_103716g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.03 Archaeplastida
MA_10430145g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10433252g0020 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.03 Archaeplastida
MA_1164682g0010 No alias pectate lyase 0.03 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.02 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.05 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.03 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.05 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.03 Archaeplastida
Mp3g01000.1 No alias pectate lyase 0.06 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.03 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.03 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c3_20320V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Smo421677 No alias Probable pectate lyase 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g010740.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc03g071570.3.1 No alias pectate lyase 0.02 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.08 Archaeplastida
Solyc09g008380.3.1 No alias pectate lyase 0.02 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.04 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.03 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
AT1G04680 No alias Pectin lyase-like superfamily protein 0.03 LandPlants
AT1G67750 No alias Pectate lyase family protein 0.02 LandPlants
AT3G24230 No alias Pectate lyase family protein 0.03 LandPlants
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT3G27400 No alias Pectin lyase-like superfamily protein 0.04 LandPlants
AT3G54920 PMR6 Pectin lyase-like superfamily protein 0.02 LandPlants
AT4G13710 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT4G24780 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT5G55720 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
Gb_02248 No alias pectate lyase 0.02 LandPlants
LOC_Os10g31910.1 No alias pectate lyase 0.01 LandPlants
MA_101171g0010 No alias pectate lyase 0.01 LandPlants
MA_103716g0010 No alias pectate lyase 0.03 LandPlants
MA_10430145g0020 No alias pectate lyase 0.02 LandPlants
MA_10433252g0020 No alias pectate lyase 0.03 LandPlants
MA_1164682g0010 No alias pectate lyase 0.02 LandPlants
MA_203992g0010 No alias pectate lyase 0.03 LandPlants
MA_66914g0010 No alias pectate lyase 0.02 LandPlants
MA_91467g0020 No alias pectate lyase 0.02 LandPlants
MA_97947g0010 No alias pectate lyase 0.02 LandPlants
Mp3g01000.1 No alias pectate lyase 0.03 LandPlants
Mp8g00770.1 No alias pectate lyase 0.01 LandPlants
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
Solyc03g071570.3.1 No alias pectate lyase 0.02 LandPlants
Solyc06g083580.4.1 No alias pectate lyase 0.06 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 160 345
No external refs found!