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  5. Spa_g47542

Spa_g47542


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47542

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00143970 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00212100 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Als_g10388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_18853g0020 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g19046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023856_P001 Zm00001e023856 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 62 117
No external refs found!