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  5. Spa_g47058

Spa_g47058


Description : actin filament-bundling factor *(THRUMIN) & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47058
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT5G13810 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
Adi_g115156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02462 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aev_g11362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08420 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aob_g13652 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G084000.1 Ceric.05G084000 not classified & original description: pacid=50577200... 0.03 OrthoFinder output from all 47 species
Ceric.25G027400.1 Ceric.25G027400 not classified & original description: pacid=50593261... 0.02 OrthoFinder output from all 47 species
Ceric.28G008200.1 Ceric.28G008200 not classified & original description: pacid=50570487... 0.03 OrthoFinder output from all 47 species
Ceric.35G044200.1 Ceric.35G044200 not classified & original description: pacid=50582031... 0.05 OrthoFinder output from all 47 species
Ceric.35G055600.1 Ceric.35G055600 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g16896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011378001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os07g06600.1 LOC_Os07g06600 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24638 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g40107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020827 No alias not classified & original description: CDS=1-1818 0.04 OrthoFinder output from all 47 species
Sam_g09292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g087850.1.1 Solyc02g087850 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027282_P001 Zm00001e027282 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 512 578
No external refs found!