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  5. Spa_g46860

Spa_g46860 (HVA22F)


Aliases : HVA22F

Description : not classified & original description: none


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46860

Target Alias Description ECC score Gene Family Method Actions
Adi_g002279 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00262.t1 HVA22F, Aspi01Gene00262 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G028300.1 HVA22F, Ceric.13G028300 not classified & original description: pacid=50636869... 0.03 OrthoFinder output from all 47 species
GSVIVT01000808001 HVA22F HVA22-like protein f OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006444 ATHVA22A, HVA22A not classified & original description: CDS=855-1079 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021184 HVA22F not classified & original description: CDS=1-327 0.02 OrthoFinder output from all 47 species
Solyc06g072680.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 148.0) 0.03 OrthoFinder output from all 47 species
Spa_g54280 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028216_P002 HVA22F, Zm00001e028216 HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 94 168
No external refs found!