Zm00001d046501


Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d046501
Cluster HCCA cluster: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.03 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.07 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
GSVIVT01005747001 No alias No description available 0.02 Gene family
GSVIVT01017315001 No alias No description available 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
GSVIVT01035098001 No alias No description available 0.04 Gene family
GSVIVT01035852001 No alias No description available 0.01 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
GSVIVT01036228001 No alias No description available 0.02 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g12440 Os01g0224100 No description available 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.12 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.03 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g18650 Os04g0257500 17.5.3 hormone... 0.02 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.03 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g28350 Os05g0351200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.1 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.03 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_180106g0010 No alias No description available 0.02 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_24801g0010 No alias No description available 0.02 Gene family
MA_30120g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.08 Gene family
MA_77420g0010 No alias No description available 0.03 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.02 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.03 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc03g006320.1.1 Solyc03g006320.1 No description available 0.01 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.03 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.02 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.09 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.04 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc08g082210.3.1 Solyc08g082210.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017480 GRMZM5G816314 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d030862 GRMZM2G039112 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 51
No external refs found!