Spa_g45656


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45656

Target Alias Description ECC score Gene Family Method Actions
Adi_g005780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099342 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24367 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03214 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30625 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g58686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63542 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g38634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001624 No alias not classified & original description: CDS=110-1882 0.05 OrthoFinder output from all 47 species
Cba_g04699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g27691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g44878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45939 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.04 OrthoFinder output from all 47 species
Ceric.07G041900.1 Ceric.07G041900 not classified & original description: pacid=50628055... 0.04 OrthoFinder output from all 47 species
Ceric.10G012900.1 CRR22, Ceric.10G012900 not classified & original description: pacid=50612392... 0.03 OrthoFinder output from all 47 species
Dac_g06782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18152 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18423 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43859 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08459 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38659 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40796 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04760 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_210823g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Msp_g02083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26887 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g24321 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 310
IPR002885 Pentatricopeptide_repeat 51 75
IPR002885 Pentatricopeptide_repeat 254 277
IPR002885 Pentatricopeptide_repeat 153 175
IPR002885 Pentatricopeptide_repeat 179 225
IPR002885 Pentatricopeptide_repeat 77 123
No external refs found!