Spa_g45259


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45259

Target Alias Description ECC score Gene Family Method Actions
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g036031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g053801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23478 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g32918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g63826 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69046 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27524 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G031800.1 Ceric.03G031800 not classified & original description: pacid=50573080... 0.04 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.05 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.05 OrthoFinder output from all 47 species
Ceric.30G017600.1 Ceric.30G017600 not classified & original description: pacid=50608172... 0.07 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19384 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Len_g55702 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19554 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22924 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43448 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024060 No alias not classified & original description: CDS=1-2526 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.03 OrthoFinder output from all 47 species
Spa_g02164 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21674 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g18799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 225
IPR002885 Pentatricopeptide_repeat 75 122
No external refs found!