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  4. Sequence
  5. Spa_g45040

Spa_g45040


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45040

Target Alias Description ECC score Gene Family Method Actions
Ala_g11001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08891 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57992.t1 Aspi01Gene57992 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57993.t1 Aspi01Gene57993 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69014.t1 Aspi01Gene69014 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0310.g064122 No alias not classified & original description: CDS=91-1152 0.02 OrthoFinder output from all 47 species
Azfi_s0310.g064128 No alias not classified & original description: CDS=310-1077 0.02 OrthoFinder output from all 47 species
Ceric.11G038900.1 Ceric.11G038900 not classified & original description: pacid=50595966... 0.02 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019741001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05840.2 LOC_Os01g05840 Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os04g22380.1 LOC_Os04g22380 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Msp_g31463 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37039 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g40980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420931 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.01 OrthoFinder output from all 47 species
Spa_g25270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g19332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016903_P001 Zm00001e016903 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 34 177
No external refs found!