Pp3c16_8750V3.1


Description : elongator protein 2


Gene families : OG_01_0004276 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004276_tree ,
OG_02_0008872 (LandPlants) Phylogenetic Tree(s): OG_02_0008872_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_8750V3.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre10.g442700 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
LOC_Os06g08770.1 No alias helicase component RVB of chromatin remodeling complex 0.03 Archaeplastida
Zm00001e010626_P001 No alias helicase component RVB of chromatin remodeling complex 0.02 Archaeplastida
Zm00001e035364_P001 No alias helicase component RVB of chromatin remodeling complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 875 1220
IPR041048 RuvB-like_C 1225 1290
IPR001680 WD40_repeat 682 714
IPR001680 WD40_repeat 50 96
IPR001680 WD40_repeat 113 146
No external refs found!