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  5. Spa_g43313

Spa_g43313 (MCM7, PRL)


Aliases : MCM7, PRL

Description : not classified & original description: none


Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g43313

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00218750 MCM9,... Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.02 OrthoFinder output from all 47 species
Aop_g23244 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
MA_10426237g0010 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.03 OrthoFinder output from all 47 species
MA_10434231g0010 MCM4 DNA replication licensing factor MCM4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp2g02600.1 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.03 OrthoFinder output from all 47 species
Sam_g06717 No alias component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Sam_g09734 No alias component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Sam_g27151 No alias component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Solyc01g079500.4.1 MCM7, PRL, Solyc01g079500 component MCM7 of MCM replicative DNA helicase complex 0.03 OrthoFinder output from all 47 species
Spa_g10751 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Spa_g11927 MCM7, PRL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11928 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Tin_g06082 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Zm00001e018214_P001 MCM7, PRL, Zm00001e018214 component MCM7 of MCM replicative DNA helicase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005892 acetylcholine-gated channel complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0098802 plasma membrane signaling receptor complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 142 272
IPR027925 MCM_N 23 130
No external refs found!