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  5. Spa_g43106

Spa_g43106 (QRT3)


Aliases : QRT3

Description : polygalacturonase *(QRT3) & original description: none


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g43106
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03255p00000400 QRT3,... Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0006.g010377 QRT3 polygalacturonase *(QRT3) & original description: CDS=62-1624 0.04 OrthoFinder output from all 47 species
Ceric.15G061400.1 QRT3, Ceric.15G061400 polygalacturonase *(QRT3) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g16097 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01012139001 QRT3 Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g58008 QRT3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44003 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26325 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13886 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g068400.3.1 QRT3, Solyc02g068400 polygalacturonase (QRT3) 0.07 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!