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Description : component *(eS12) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g42585 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G15930 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G32060 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102620 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18767 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cre04.g214503 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25477 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23193 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g05580.1 | LOC_Os07g05580 | component RPS12 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g20839 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_16920g0010 | No alias | component RPS12 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g11470.1 | No alias | component RPS12 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15650 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09099 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34842 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g042650.2.1 | Solyc12g042650 | component RPS12 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17185 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 12 | 105 |
| No external refs found! |