Spa_g42185

Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g42185
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00179170	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
AT2G37600	No alias	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
AT3G53740	No alias	Ribosomal protein L36e family protein	0.04	OrthoFinder output from all 47 species
AT5G02450	No alias	Ribosomal protein L36e family protein	0.04	OrthoFinder output from all 47 species
Aev_g05093	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g30265	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g16043	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aspi01Gene41378.t1	Aspi01Gene41378	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0049.g030800	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0383.g067431	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021493.69	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Cre12.g484050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Dac_g01113	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g17175	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dde_g08967	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01026914001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01028917001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Gb_10248	No alias	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Gb_27261	No alias	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os01g62350.1	LOC_Os01g62350	component RPL36 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os05g38520.1	LOC_Os05g38520	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_10430792g0010	No alias	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_149937g0010	No alias	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_69756g0010	No alias	component RPL36 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Nbi_g20965	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c14_19960V3.1	Pp3c14_19960	Ribosomal protein L36e family protein	0.01	OrthoFinder output from all 47 species
Pp3c1_32310V3.1	Pp3c1_32310	Ribosomal protein L36e family protein	0.03	OrthoFinder output from all 47 species
Sam_g07231	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g31192	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g41738	No alias	component *(eL36) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Smo267958	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Smo439710	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Solyc06g036050.4.1	Solyc06g036050	component RPL36 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e027238_P001	Zm00001e027238	component RPL36 of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005787	signal peptidase complex	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	HCCA
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	8	101

External Links

No external refs found!

Spa_g42185

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation