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  5. Spa_g42162

Spa_g42162


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42162

Target Alias Description ECC score Gene Family Method Actions
Aev_g27789 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g35688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38416 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g49839 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g19104 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16925 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g09901 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g12087 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06952 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g18217 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene26701.t1 Aspi01Gene26701 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29047.t2 Aspi01Gene29047 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52217.t1 Aspi01Gene52217 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0387.g067575 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g05380 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06996 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70328 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.07G032900.1 Ceric.07G032900 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z015800.1 ZOU, RGE1, Ceric.1Z015800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11590 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07341 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g18505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21206 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48632 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04290 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12911 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05748 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06333 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008993 No alias bHLH-type transcription factor & original description: CDS=1-1788 0.01 OrthoFinder output from all 47 species
Spa_g53612 BIM2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02942 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g11161 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30853 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44871 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g45468 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 328 378
No external refs found!