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  5. Spa_g42097

Spa_g42097


Description : regulatory protein *(ASPM) of microtubule minus-end stability & original description: none


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42097

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00144520 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT4G21820 No alias binding;calmodulin binding 0.05 OrthoFinder output from all 47 species
Aop_g05233 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.07 OrthoFinder output from all 47 species
Azfi_s0004.g008280 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.05 OrthoFinder output from all 47 species
Ceric.23G023300.1 Ceric.23G023300 regulatory protein *(ASPM) of microtubule minus-end... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre06.g281200 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.08 OrthoFinder output from all 47 species
GSVIVT01002377001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_33771 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_33772 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os07g33370.1 LOC_Os07g33370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g09758 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species
MA_10431293g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g38961 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.05 OrthoFinder output from all 47 species
Nbi_g08418 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species
Ppi_g30759 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.03 OrthoFinder output from all 47 species
Smo419634 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc02g080400.3.1 Solyc02g080400 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g13979 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 641 726
IPR001715 CH_dom 511 601
IPR000048 IQ_motif_EF-hand-BS 945 965
IPR000048 IQ_motif_EF-hand-BS 1110 1122
IPR000048 IQ_motif_EF-hand-BS 1085 1100
IPR000048 IQ_motif_EF-hand-BS 1344 1362
IPR000048 IQ_motif_EF-hand-BS 1251 1269
IPR000048 IQ_motif_EF-hand-BS 862 878
IPR000048 IQ_motif_EF-hand-BS 1415 1433
IPR000048 IQ_motif_EF-hand-BS 1734 1749
IPR000048 IQ_motif_EF-hand-BS 1570 1584
IPR000048 IQ_motif_EF-hand-BS 837 855
IPR000048 IQ_motif_EF-hand-BS 1590 1608
IPR000048 IQ_motif_EF-hand-BS 1063 1081
IPR000048 IQ_motif_EF-hand-BS 1708 1727
No external refs found!