Spa_g42035 (PTB2, ATPTB2)

Aliases : PTB2, ATPTB2

Description : RNA splicing factor *(PTB) & original description: none

Gene families : OG0001527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001527_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g42035

Target	Alias	Description	ECC score	Gene Family Method
Ceric.07G100400.1	PTB2, ATPTB2,...	RNA splicing factor *(PTB) & original description:...	0.03	OrthoFinder output from all 47 species
Len_g14452	PTB2, ATPTB2	RNA splicing factor *(PTB) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e037953_P002	Zm00001e037953	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	23	73
IPR021790	PTBP1-like_RRM2	244	321

External Links

No external refs found!