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  5. Spa_g41963

Spa_g41963 (FBX2)


Aliases : FBX2

Description : substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0005464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41963
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Ehy_g05866 FBX2 substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01037436001 FBX2 F-box/WD-40 repeat-containing protein At5g21040... 0.02 OrthoFinder output from all 47 species
Lfl_g30129 FBX2 substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g07165 FBX2 substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g24790 No alias substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc06g073650.1.1 FBX2, Solyc06g073650 F-box/WD-40 repeat-containing protein At5g21040... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 124 161
IPR001680 WD40_repeat 391 420
IPR001680 WD40_repeat 216 247
IPR001680 WD40_repeat 308 340
No external refs found!