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  5. Spa_g41931

Spa_g41931 (EIR1, WAV6, ATPIN2,...)


Aliases : EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41931
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
Aev_g39537 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52690 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18588 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G075900.1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g03399 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14691 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33596 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19454 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01025748001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Gb_23207 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50960.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14570 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
MA_61553g0020 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_69724g0010 ATPIN1, PIN1 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Msp_g43637 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12616 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05421 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07069 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07600 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc04g056620.2.1 PIN5, Solyc04g056620 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e020346_P002 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 229
IPR004776 Mem_trans 263 784
No external refs found!