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  5. Spa_g41739

Spa_g41739


Description : regulatory component *(PP4R3) of PP4 phosphatase complex & original description: none


Gene families : OG0002351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41739

Target Alias Description ECC score Gene Family Method Actions
Aev_g08027 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Als_g14683 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Aop_g05036 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22971.t1 Aspi01Gene22971 regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Ceric.06G000800.1 Ceric.06G000800 regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Dcu_g15371 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Dde_g06012 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Lfl_g40402 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Mp7g09510.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.02 OrthoFinder output from all 47 species
Msp_g31246 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Pir_g17986 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Pnu_g20515 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Sam_g18621 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Sam_g24466 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 OrthoFinder output from all 47 species
Smo416323 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Solyc12g099320.2.1 Solyc12g099320 regulatory component PP4R3 of PP4 phosphatase complex 0.02 OrthoFinder output from all 47 species
Tin_g03485 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Zm00001e026266_P001 Zm00001e026266 regulatory component PP4R3 of PP4 phosphatase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006887 P4R3-like_central_dom 178 365
No external refs found!