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  5. Spa_g41522

Spa_g41522


Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41522
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00123190 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
AT3G07010 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24230 No alias Pectate lyase family protein 0.04 OrthoFinder output from all 47 species
AT3G27400 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G13210 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G22080 RHS14 root hair specific 14 0.03 OrthoFinder output from all 47 species
Aev_g19777 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38995 RHS14 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27583 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28413 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21580 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G068000.1 Ceric.22G068000 EC_4.2 carbon-oxygen lyase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.26G007400.1 Ceric.26G007400 EC_4.2 carbon-oxygen lyase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.30G051100.1 RHS14, Ceric.30G051100 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G051200.1 RHS14, Ceric.30G051200 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G056400.1 Ceric.31G056400 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11741 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12057 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39421 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35840 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46389 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46894 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03656 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 OrthoFinder output from all 47 species
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 OrthoFinder output from all 47 species
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 OrthoFinder output from all 47 species
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 OrthoFinder output from all 47 species
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 OrthoFinder output from all 47 species
LOC_Os02g12300.1 AT59, LOC_Os02g12300 pectate lyase 0.02 OrthoFinder output from all 47 species
LOC_Os06g05260.1 LOC_Os06g05260 pectate lyase 0.03 OrthoFinder output from all 47 species
LOC_Os06g38510.2 LOC_Os06g38510 pectate lyase 0.02 OrthoFinder output from all 47 species
Len_g50589 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10353668g0010 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
MA_10429028g0020 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
MA_62112g0010 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
MA_66914g0010 No alias pectate lyase 0.06 OrthoFinder output from all 47 species
MA_91467g0010 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
Mp3g01000.1 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
Mp8g00770.1 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
Mp8g10190.1 No alias pectate lyase 0.05 OrthoFinder output from all 47 species
Msp_g10750 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38292 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01001 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43436 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26215 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28391 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41164 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41165 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24097 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16370V3.1 Pp3c17_16370 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g06396 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27978 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g010740.4.1 AT59, Solyc01g010740 pectate lyase 0.03 OrthoFinder output from all 47 species
Solyc06g071840.3.1 Solyc06g071840 Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g008140.3.1 Solyc11g008140 pectate lyase 0.03 OrthoFinder output from all 47 species
Spa_g47003 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57258 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07683 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15440 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008755_P002 Zm00001e008755 pectate lyase 0.03 OrthoFinder output from all 47 species
Zm00001e024959_P001 AT59, Zm00001e024959 pectate lyase 0.03 OrthoFinder output from all 47 species
Zm00001e040624_P001 Zm00001e040624 pectate lyase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 137 319
No external refs found!