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  5. Spa_g41418

Spa_g41418


Description : not classified & original description: none


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41418
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00166070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G67040 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G58650 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Ceric.06G066100.1 Ceric.06G066100 not classified & original description: pacid=50619532... 0.1 OrthoFinder output from all 47 species
Ceric.17G018400.1 Ceric.17G018400 not classified & original description: pacid=50618175... 0.06 OrthoFinder output from all 47 species
Ceric.24G058500.1 Ceric.24G058500 not classified & original description: pacid=50628935... 0.04 OrthoFinder output from all 47 species
GSVIVT01035042001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os03g19080.3 LOC_Os03g19080 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g40624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434911g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003194 No alias not classified & original description: CDS=1-3084 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g007008 No alias not classified & original description: CDS=144-3170 0.04 OrthoFinder output from all 47 species
Solyc01g060410.4.1 Solyc01g060410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g08470 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001394_P001 Zm00001e001394 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e006276_P001 Zm00001e006276 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038358_P001 Zm00001e038358 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032795 DUF3741-assoc 110 134
IPR025486 DUF4378 861 1035
No external refs found!