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  5. Spa_g41003

Spa_g41003


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.06 OrthoFinder output from all 47 species
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Ehy_g05547 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_11447 WLIM1 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Solyc04g077780.3.1 WLIM1, Solyc04g077780 transcription factor (LIM) 0.05 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.01 OrthoFinder output from all 47 species
Zm00001e030885_P002 WLIM1, Zm00001e030885 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 107 162
IPR001781 Znf_LIM 10 65
No external refs found!