Pp3c16_3920V3.1


Description : related to ubiquitin 1


Gene families : OG_01_0000077 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000077_tree ,
OG_02_0000113 (LandPlants) Phylogenetic Tree(s): OG_02_0000113_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_3920V3.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.02 Archaeplastida
AMTR_s00095p00146440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01001971001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_01257 No alias component RPL40 of LSU proteome component 0.06 Archaeplastida
Gb_15027 No alias component RPS27a of SSU proteome 0.02 Archaeplastida
Gb_28672 No alias ubiquitin-fold protein (RUB) 0.04 Archaeplastida
Gb_30150 No alias ubiquitin-fold protein (RUB) 0.02 Archaeplastida
Gb_40288 No alias component RPS27a of SSU proteome 0.01 Archaeplastida
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.02 Archaeplastida
Solyc01g068045.1.1 No alias component RPS27a of SSU proteome 0.02 Archaeplastida
Zm00001e000962_P001 No alias component RPL40 of LSU proteome component 0.03 Archaeplastida
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.01 LandPlants
AMTR_s00095p00146440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 LandPlants
GSVIVT01001971001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01028198001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_01257 No alias component RPL40 of LSU proteome component 0.03 LandPlants
Gb_15027 No alias component RPS27a of SSU proteome 0.01 LandPlants
Gb_28672 No alias ubiquitin-fold protein (RUB) 0.04 LandPlants
Gb_30150 No alias ubiquitin-fold protein (RUB) 0.02 LandPlants
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.01 LandPlants
Mp8g11720.1 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... 0.02 LandPlants
Smo93613 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!