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  4. Sequence
  5. Spa_g40906

Spa_g40906


Description : not classified & original description: none


Gene families : OG0001244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001244_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40906
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00160150 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g05486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G059000.1 Ceric.22G059000 not classified & original description: pacid=50614041... 0.04 OrthoFinder output from all 47 species
Dcu_g25472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01031090001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os06g27980.1 LOC_Os06g27980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g24283 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g26111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27189 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_6067g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g15060.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g33454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo84529 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc11g010580.2.1 Solyc11g010580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019019_P001 Zm00001e019019 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021858_P001 Zm00001e021858 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029139_P001 Zm00001e029139 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 215 413
No external refs found!