Zm00001d045625 (GRMZM2G053210)


Aliases : GRMZM2G053210

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d045625
Cluster HCCA cluster: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.7 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os03g59760 Os03g0812200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATCRT1 0.02 Gene family
LOC_Os06g42700 Os06g0633500 31.1 cell.organisation Encodes a RING-H2 protein that... 0.05 Gene family
LOC_Os08g36170 Os08g0464400 No description available 0.04 Gene family
LOC_Os10g34590 Os10g0487400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g098590.3.1 Solyc03g098590.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc09g074460.2.1 Solyc09g074460.2 31.1 cell.organisation Encodes a RING-H2 protein that... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 178 220
IPR039525 RNF126-like_zinc-ribbon 9 44
No external refs found!