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  5. Spa_g40300

Spa_g40300 (ADF11)


Aliases : ADF11

Description : actin-depolymerizing factor & original description: none


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40300
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Ala_g32061 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36159 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01151 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36617 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54255 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20237 No alias actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23170 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48490 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001010_P001 ADF5, ATADF5,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 13 136
No external refs found!